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	//===-- apps/ccam/ccam.cpp --------------------------------------- C++ --===//
	//
	// The RoSA Framework -- Application CCAM
	//
	//===----------------------------------------------------------------------===//
	///
	/// \file apps/ccam/ccam.cpp
	///
	/// \author Maximilian Goetzinger (maximilian.goetzinger@tuwien.ac.at)
	/// \author Benedikt Tutzer (benedikt.tutzer@tuwien.ac.at)
	///
	/// \date 2019
	///
	/// \brief The application CCAM implements the case study from the paper:
	/// M. Goetzinger, N. TaheriNejad, H. A. Kholerdi, A. Jantsch, E. Willegger,
	/// T. Glatzl, A.M. Rahmani, T.Sauter, P. Liljeberg: Model - Free Condition
	/// Monitoring with Confidence
	//===----------------------------------------------------------------------===//
	#include "rosa/agent/Abstraction.hpp"
	#include "rosa/agent/Confidence.hpp"
	#include "rosa/agent/FunctionAbstractions.hpp"
	#include <iostream>

	#include "rosa/config/version.h"

	#include "rosa/agent/SignalStateDetector.hpp"
	#include "rosa/agent/SystemStateDetector.hpp"
	#include "rosa/deluxe/DeluxeContext.hpp"

	#include "rosa/support/csv/CSVReader.hpp"
	#include "rosa/support/csv/CSVWriter.hpp"

	#include <fstream>
	#include <limits>
	#include <memory>
	#include <streambuf>

	#include "configuration.h"
	#include "statehandlerutils.h"

	using namespace rosa;
	using namespace rosa::agent;
	using namespace rosa::deluxe;
	using namespace rosa::terminal;

	const std::string AppName = "CCAM";

	int main(int argc, char **argv) {

	LOG_INFO_STREAM << '\n'
	<< library_string() << " -- " << Color::Red << AppName
	<< "app" << Color::Default << '\n';

	if (argc < 2) {
	LOG_ERROR("Specify config File!\nUsage:\n\tccam config.json");
	return 1;
	}
	std::string ConfigPath = argv[1];

	if (!readConfigFile(ConfigPath)) {
	LOG_ERROR_STREAM << "Could not read config from \"" << ConfigPath << "\"\n";
	return 2;
	}

	std::string InputFilePath, OutputFilePath;

	LOG_INFO("Creating Context");
	std::unique_ptr<DeluxeContext> C = DeluxeContext::create(AppName);

	std::shared_ptr<PartialFunction<uint32_t, float>> BrokenDelayFunction(
	new PartialFunction<uint32_t, float>(
	{{{0, AppConfig.BrokenCounter},
	std::make_shared<LinearFunction<uint32_t, float>>(
	0, 0.f, AppConfig.BrokenCounter, 1.f)},
	{{AppConfig.BrokenCounter, std::numeric_limits<uint32_t>::max()},
	std::make_shared<LinearFunction<uint32_t, float>>(1.f, 0.f)}},
	0.f));

	std::shared_ptr<PartialFunction<uint32_t, float>> OkDelayFunction(
	new PartialFunction<uint32_t, float>(
	{{{0, AppConfig.BrokenCounter},
	std::make_shared<LinearFunction<uint32_t, float>>(
	0, 1.f, AppConfig.BrokenCounter, 0.f)},
	{{AppConfig.BrokenCounter, std::numeric_limits<uint32_t>::max()},
	std::make_shared<LinearFunction<uint32_t, float>>(0.f, 0.f)}},
	1.f));

	//
	// Create a DeluxeAgent with SystemStateDetector functionality.
	//
	LOG_INFO("Create SystemStateDetector agent.");
	AgentHandle SystemStateDetectorAgent = createSystemStateDetectorAgent(
	C, "SystemStateDetector", AppConfig.SignalConfigurations.size(),
	BrokenDelayFunction, OkDelayFunction);

	std::set<size_t> pos;
	for (size_t i = 0; i < AppConfig.SignalConfigurations.size(); ++i)
	pos.insert(pos.end(), i);

	C->setExecutionPolicy(SystemStateDetectorAgent,
	DeluxeExecutionPolicy::awaitAll(pos));

	LOG_INFO("Creating sensors, SignalStateDetector functionalities and their "
	"Abstractions.");
	std::vector<AgentHandle> Sensors;
	std::vector<std::shared_ptr<PartialFunction<float, float>>>
	SampleMatchesFunctions;
	std::vector<std::shared_ptr<PartialFunction<float, float>>>
	SampleMismatchesFunctions;
	std::vector<std::shared_ptr<PartialFunction<float, float>>>
	SignalIsStableFunctions;
	std::vector<std::shared_ptr<PartialFunction<float, float>>>
	SignalIsDriftingFunctions;
	std::vector<std::shared_ptr<StepFunction<float, float>>>
	NumOfSamplesMatchFunctions;
	std::vector<std::shared_ptr<StepFunction<float, float>>>
	NumOfSamplesMismatchFunctions;
	std::vector<std::shared_ptr<
	SignalStateDetector<float, float, float, HistoryPolicy::FIFO>>>
	SignalStateDetectors;
	std::vector<AgentHandle> SignalStateDetectorAgents;
	std::vector<std::ifstream> DataFiles;

	for (auto SignalConfiguration : AppConfig.SignalConfigurations) {
	//
	// Create deluxe sensors.
	//
	Sensors.emplace_back(
	C->createSensor<float>(SignalConfiguration.Name + "_Sensor"));

	//
	// Create functionalities for SignalStateDetector.
	//
	SampleMatchesFunctions.emplace_back(new PartialFunction<float, float>(
	{
	{{-SignalConfiguration.OuterBound, -SignalConfiguration.InnerBound},
	std::make_shared<LinearFunction<float, float>>(
	-SignalConfiguration.OuterBound, 0.f,
	-SignalConfiguration.InnerBound, 1.f)},
	{{-SignalConfiguration.InnerBound, SignalConfiguration.InnerBound},
	std::make_shared<LinearFunction<float, float>>(1.f, 0.f)},
	{{SignalConfiguration.InnerBound, SignalConfiguration.OuterBound},
	std::make_shared<LinearFunction<float, float>>(
	SignalConfiguration.InnerBound, 1.f,
	SignalConfiguration.OuterBound, 0.f)},
	},
	0));

	SampleMismatchesFunctions.emplace_back(new PartialFunction<float, float>(
	{
	{{-SignalConfiguration.OuterBound, -SignalConfiguration.InnerBound},
	std::make_shared<LinearFunction<float, float>>(
	-SignalConfiguration.OuterBound, 1.f,
	-SignalConfiguration.InnerBound, 0.f)},
	{{-SignalConfiguration.InnerBound, SignalConfiguration.InnerBound},
	std::make_shared<LinearFunction<float, float>>(0.f, 0.f)},
	{{SignalConfiguration.InnerBound, SignalConfiguration.OuterBound},
	std::make_shared<LinearFunction<float, float>>(
	SignalConfiguration.InnerBound, 0.f,
	SignalConfiguration.OuterBound, 1.f)},
	},
	1));

	SignalIsStableFunctions.emplace_back(new PartialFunction<float, float>(
	{
	{{-SignalConfiguration.OuterBoundDrift,
	-SignalConfiguration.InnerBoundDrift},
	std::make_shared<LinearFunction<float, float>>(
	-SignalConfiguration.OuterBoundDrift, 0.f,
	-SignalConfiguration.InnerBoundDrift, 1.f)},
	{{-SignalConfiguration.InnerBoundDrift,
	SignalConfiguration.InnerBoundDrift},
	std::make_shared<LinearFunction<float, float>>(1.f, 0.f)},
	{{SignalConfiguration.InnerBoundDrift,
	SignalConfiguration.OuterBoundDrift},
	std::make_shared<LinearFunction<float, float>>(
	SignalConfiguration.InnerBoundDrift, 1.f,
	SignalConfiguration.OuterBoundDrift, 0.f)},
	},
	0));

	SignalIsDriftingFunctions.emplace_back(new PartialFunction<float, float>(
	{
	{{-SignalConfiguration.OuterBoundDrift,
	-SignalConfiguration.InnerBoundDrift},
	std::make_shared<LinearFunction<float, float>>(
	-SignalConfiguration.OuterBoundDrift, 1.f,
	-SignalConfiguration.InnerBoundDrift, 0.f)},
	{{-SignalConfiguration.InnerBoundDrift,
	SignalConfiguration.InnerBoundDrift},
	std::make_shared<LinearFunction<float, float>>(0.f, 0.f)},
	{{SignalConfiguration.InnerBoundDrift,
	SignalConfiguration.OuterBoundDrift},
	std::make_shared<LinearFunction<float, float>>(
	SignalConfiguration.InnerBoundDrift, 0.f,
	SignalConfiguration.OuterBoundDrift, 1.f)},
	},
	1));

	NumOfSamplesMatchFunctions.emplace_back(new StepFunction<float, float>(
	1.0f / SignalConfiguration.SampleHistorySize, StepDirection::StepUp));

	NumOfSamplesMismatchFunctions.emplace_back(new StepFunction<float, float>(
	1.0f / SignalConfiguration.SampleHistorySize, StepDirection::StepDown));

	//
	// Create SignalStateDetector functionality
	//
	SignalStateDetectors.emplace_back(
	new SignalStateDetector<float, float, float, HistoryPolicy::FIFO>(
	SignalConfiguration.Output ? SignalProperties::OUTPUT
	: SignalProperties::INPUT,
	std::numeric_limits<int>::max(), SampleMatchesFunctions.back(),
	SampleMismatchesFunctions.back(), NumOfSamplesMatchFunctions.back(),
	NumOfSamplesMismatchFunctions.back(),
	SignalIsDriftingFunctions.back(), SignalIsStableFunctions.back(),
	SignalConfiguration.SampleHistorySize, SignalConfiguration.DABSize,
	SignalConfiguration.DABHistorySize));

	//
	// Create low-level deluxe agents
	//
	SignalStateDetectorAgents.push_back(createSignalStateDetectorAgent(
	C, SignalConfiguration.Name, SignalStateDetectors.back()));

	C->setExecutionPolicy(
	SignalStateDetectorAgents.back(),
	DeluxeExecutionPolicy::decimation(AppConfig.DownsamplingRate));
	//
	// Connect sensors to low-level agents.
	//
	LOG_INFO("Connect sensors to their corresponding low-level agents.");

	C->connectSensor(SignalStateDetectorAgents.back(), 0, Sensors.back(),
	SignalConfiguration.Name + "_Sensor ->" +
	SignalConfiguration.Name +
	"_SignalStateDetector_Agent-Channel");

	C->connectAgents(
	SystemStateDetectorAgent, SignalStateDetectors.size() - 1,
	SignalStateDetectorAgents.back(),
	SignalConfiguration.Name +
	"_SignalStateDetector_Agent->SystemStateDetector_Agent_Channel");
	}

	//
	// For simulation output, create a logger agent writing the output of the
	// high-level agent into a CSV file.
	//
	LOG_INFO("Create a logger agent.");

	// Create CSV writer.
	std::ofstream OutputCSV(AppConfig.OutputFilePath);

	for (auto SignalConfiguration : AppConfig.SignalConfigurations) {
	OutputCSV << SignalConfiguration.Name + ",";
	}
	OutputCSV << "StateID,";
	OutputCSV << "Confidence State Valid,";
	OutputCSV << "Confidence State Invalid,";
	OutputCSV << "Confidence Inputs Matching,";
	OutputCSV << "Confidence Outputs Matching,";
	OutputCSV << "Confidence Inputs Mismatching,";
	OutputCSV << "Confidence Outputs Mismatching,";
	OutputCSV << "State Condition,";
	OutputCSV << "Confidence System Functioning,";
	OutputCSV << "Confidence System Malfunctioning,";
	OutputCSV << "Overall Confidence,";
	OutputCSV << "\n";

	// The agent writes each new input value into a CSV file and produces
	// nothing.
	using Input = std::pair<SystemStateTuple, bool>;
	using Result = Optional<DeluxeTuple<unit_t>>;
	using Handler = std::function<Result(Input)>;
	std::string Name = "Logger Agent";

	AgentHandle LoggerAgent =
	C->createAgent("Logger Agent", Handler([&OutputCSV](Input I) -> Result {
	OutputCSV << std::get<0>(I.first) << std::endl;
	return Result();
	}));
	//
	// Connect the high-level agent to the logger agent.
	//
	LOG_INFO("Connect the high-level agent to the logger agent.");

	C->connectAgents(LoggerAgent, 0, SystemStateDetectorAgent,
	"SystemStateDetector Channel");

	//
	// Only log if the SystemStateDetector actually ran
	//
	C->setExecutionPolicy(LoggerAgent, DeluxeExecutionPolicy::awaitAll({0}));

	//
	// Do simulation.
	//
	LOG_INFO("Setting up and performing simulation.");

	//
	// Initialize deluxe context for simulation.
	//
	C->initializeSimulation();

	//
	// Open CSV files and register them for their corresponding sensors.
	//
	// Make sure DataFiles will not change capacity while adding elements to it.
	// Changing capacity moves elements away, which invalidates references
	// captured by CSVIterator.
	DataFiles.reserve(AppConfig.SignalConfigurations.size());
	uint32_t i = 0;
	for (auto SignalConfiguration : AppConfig.SignalConfigurations) {
	DataFiles.emplace_back(SignalConfiguration.InputPath);
	if (!DataFiles.at(i)) {
	LOG_ERROR_STREAM << "Cannot open Input File \""
	<< SignalConfiguration.InputPath << "\" for Signal \""
	<< SignalConfiguration.Name << "\"" << std::endl;
	return 3;
	}

	C->registerSensorValues(Sensors.at(i),
	csv::CSVIterator<float>(DataFiles.at(i)),
	csv::CSVIterator<float>());
	i++;
	}

	//
	// Simulate.
	//
	C->simulate(AppConfig.NumberOfSimulationCycles);

	return 0;
	}

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